Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

ARID5B - AT-rich interaction domain 5B

Function

Transcription coactivator that binds to the 5'-AATA[CT]-3' core sequence and plays a key role in adipogenesis and liver development. Acts by forming a complex with phosphorylated PHF2, which mediates demethylation at Lys-336, leading to target the PHF2-ARID5B complex to target promoters, where PHF2 mediates demethylation of dimethylated 'Lys-9' of histone H3 (H3K9me2), followed by transcription activation of target genes. The PHF2-ARID5B complex acts as a coactivator of HNF4A in liver. Required for adipogenesis: regulates triglyceride metabolism in adipocytes by regulating expression of adipogenic genes. Overexpression leads to induction of smooth muscle marker genes, suggesting that it may also act as a regulator of smooth muscle cell differentiation and proliferation. Represses the cytomegalovirus enhancer.

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
84159 ENSG00000150347 ARID5B Q14865

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows with ENSG00000150347 as Regulator

IDMutationRoleRegulatorRoleRegulon# downstream regulons# diffexp regulonsDrugs
CMF-00028LRP2up-regulatesARID5BactivatesR-300842Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-00029LRP2up-regulatesARID5BactivatesR-300642Drugs (33)
CMF-02291ERGup-regulatesARID5BactivatesR-300842Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-02390LRP2up-regulatesARID5BactivatesR-300641Drugs (33)
CMF-02680SLC9A10down-regulatesARID5BactivatesR-300641Drugs (33)
CMF-03683DSPup-regulatesARID5BactivatesR-300642Drugs (33)
CMF-05059SPEGdown-regulatesARID5BactivatesR-300842Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-05060SPEGdown-regulatesARID5BactivatesR-300642Drugs (33)
CMF-08039ABCC4up-regulatesARID5BactivatesR-300641Drugs (33)
CMF-10259KIAA1462up-regulatesARID5BactivatesR-300641Drugs (33)
CMF-11190NRKup-regulatesARID5BactivatesR-300841Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-12207GPR98down-regulatesARID5BactivatesR-300842Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-12208GPR98down-regulatesARID5BactivatesR-300642Drugs (33)
CMF-15310GRM8up-regulatesARID5BactivatesR-300641Drugs (33)
CMF-15503ZNF99down-regulatesARID5BactivatesR-300842Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-15504ZNF99down-regulatesARID5BactivatesR-300642Drugs (33)
CMF-17700PCDHB13down-regulatesARID5BactivatesR-300642Drugs (33)
CMF-20035ARHGEF16down-regulatesARID5BactivatesR-300842Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-20934KLHL13up-regulatesARID5BactivatesR-300841Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-20989KRTAP4-7up-regulatesARID5BactivatesR-300842Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-20990KRTAP4-7up-regulatesARID5BactivatesR-300642Drugs (33)
CMF-22011MOCS3down-regulatesARID5BactivatesR-300842Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-24436SEMA3Cdown-regulatesARID5BactivatesR-300641Drugs (33)
CMF-27870CXorf22up-regulatesARID5BactivatesR-300843Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-27871CXorf22up-regulatesARID5BactivatesR-300643Drugs (33)
CMF-28633PCNXdown-regulatesARID5BactivatesR-300841Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-29837ABCC9up-regulatesARID5BactivatesR-300841Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-30565C17orf71up-regulatesARID5BactivatesR-300842Drugs (1)

Regulator Drugs (0)

Regulon Drugs (1)

OCRIPLASMIN

CMF-30566C17orf71up-regulatesARID5BactivatesR-300642Drugs (33)