Basic gene annotations are collected from Uniprot
and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser
is available.
LHX6 - LIM homeobox 6
Function
Probable transcription factor required for the expression of a subset of genes involved in interneurons migration and development. Functions in the specification of cortical interneuron subtypes and in the migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex (By similarity).
Uniprot BrowserEntrez ID | EnsEMBL ID | Preferred Name | Uniprot ID |
---|---|---|---|
26468 | ENSG00000106852 | LHX6 | Q9UPM6 |
Causal Flows
are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation
may causally activate or deactivate a downstream regulator
which then might up- down-regulates a regulon
that contains genes with similar expression profiles and binding sites.
Causal Mechanistic Flows with ENSG00000106852 as Regulator
ID | Mutation | Role | Regulator | Role | Regulon | # downstream regulons | # diffexp regulons | Drugs |
---|---|---|---|---|---|---|---|---|
CMF-07906 | ZCWPW1 | down-regulates | LHX6 | represses | R-2249 | 4 | 1 | Drugs (1) |
CMF-14852 | CALCR | down-regulates | LHX6 | represses | R-2249 | 4 | 2 | Drugs (1) |
CMF-15121 | KCNQ5 | down-regulates | LHX6 | represses | R-2249 | 4 | 2 | Drugs (1) |
CMF-18040 | PRPF40B | up-regulates | LHX6 | represses | R-2249 | 4 | 2 | Drugs (1) |
CMF-25610 | COL6A6 | up-regulates | LHX6 | represses | R-2249 | 4 | 1 | Drugs (1) |
CMF-25726 | FBN3 | down-regulates | LHX6 | represses | R-2249 | 4 | 2 | Drugs (1) |
CMF-25917 | MMP13 | down-regulates | LHX6 | represses | R-2249 | 4 | 1 | Drugs (1) |
CMF-29986 | GNAT3 | down-regulates | LHX6 | represses | R-2249 | 4 | 1 | Drugs (1) |
CMF-30913 | LRRC55 | down-regulates | LHX6 | represses | R-2249 | 4 | 1 | Drugs (1) |