Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

VSX1 - visual system homeobox 1

Function

Binds to the 37-bp core of the locus control region (LCR) of the red/green visual pigment gene cluster (PubMed:10903837). May regulate the activity of the LCR and the cone opsin genes at earlier stages of development (PubMed:10903837). Dispensable in early retinal development (By similarity).

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
30813 ENSG00000100987 VSX1 Q9NZR4

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows with ENSG00000100987 as Regulator

IDMutationRoleRegulatorRoleRegulon# downstream regulons# diffexp regulonsDrugs
CMF-01002TPTEdown-regulatesVSX1repressesR-2364164Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

ALEPLASININ, OCRIPLASMIN

CMF-01004TPTEdown-regulatesVSX1repressesR-2358164Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-01005TPTEdown-regulatesVSX1repressesR-2362164Drugs (8)

Regulator Drugs (0)

Regulon Drugs (8)

AMG-780, MEDI-3617, ENIBARCIMAB, TREBANANIB, VANUCIZUMAB, FARICIMAB, CVX-060, NESVACUMAB

CMF-02075FLNCup-regulatesVSX1repressesR-2365161Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

SELPERCATINIB, PRALSETINIB

CMF-02327ERGdown-regulatesVSX1repressesR-2358162Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-03102LAMA3up-regulatesVSX1repressesR-2364161Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

ALEPLASININ, OCRIPLASMIN

CMF-07347NOD2down-regulatesVSX1repressesR-2356167Drugs (33)
CMF-07348NOD2down-regulatesVSX1repressesR-2355167Drugs (83)
CMF-07351NOD2down-regulatesVSX1repressesR-2358167Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-07353NOD2down-regulatesVSX1repressesR-2362167Drugs (8)

Regulator Drugs (0)

Regulon Drugs (8)

AMG-780, MEDI-3617, ENIBARCIMAB, TREBANANIB, VANUCIZUMAB, FARICIMAB, CVX-060, NESVACUMAB

CMF-08894FNDC1down-regulatesVSX1repressesR-2362162Drugs (8)

Regulator Drugs (0)

Regulon Drugs (8)

AMG-780, MEDI-3617, ENIBARCIMAB, TREBANANIB, VANUCIZUMAB, FARICIMAB, CVX-060, NESVACUMAB

CMF-09580SH3RF2down-regulatesVSX1repressesR-2362162Drugs (8)

Regulator Drugs (0)

Regulon Drugs (8)

AMG-780, MEDI-3617, ENIBARCIMAB, TREBANANIB, VANUCIZUMAB, FARICIMAB, CVX-060, NESVACUMAB

CMF-11028BMP5down-regulatesVSX1repressesR-2358164Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-11211NRKdown-regulatesVSX1repressesR-2362163Drugs (8)

Regulator Drugs (0)

Regulon Drugs (8)

AMG-780, MEDI-3617, ENIBARCIMAB, TREBANANIB, VANUCIZUMAB, FARICIMAB, CVX-060, NESVACUMAB

CMF-11436CYP4F22down-regulatesVSX1activatesR-2361161Drugs (9)
CMF-12781ACACBdown-regulatesVSX1repressesR-2358162Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-13288SULF2up-regulatesVSX1repressesR-2356163Drugs (33)
CMF-13289SULF2up-regulatesVSX1repressesR-2355163Drugs (83)
CMF-13290SULF2up-regulatesVSX1repressesR-2358163Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-13599FMN1down-regulatesVSX1repressesR-2356167Drugs (33)
CMF-13602FMN1down-regulatesVSX1repressesR-2362167Drugs (8)

Regulator Drugs (0)

Regulon Drugs (8)

AMG-780, MEDI-3617, ENIBARCIMAB, TREBANANIB, VANUCIZUMAB, FARICIMAB, CVX-060, NESVACUMAB

CMF-13738TUBA3Cdown-regulatesVSX1repressesR-2356163Drugs (33)
CMF-13739TUBA3Cdown-regulatesVSX1repressesR-2358163Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-15451DSEdown-regulatesVSX1repressesR-2356164Drugs (33)
CMF-15745FN1down-regulatesVSX1repressesR-2358162Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-16625APOBdown-regulatesVSX1activatesR-2361161Drugs (9)
CMF-16956TIE1down-regulatesVSX1repressesR-2364162Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

ALEPLASININ, OCRIPLASMIN

CMF-17677DCAF8L2up-regulatesVSX1repressesR-2358161Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-18253CDH19down-regulatesVSX1repressesR-2362163Drugs (8)

Regulator Drugs (0)

Regulon Drugs (8)

AMG-780, MEDI-3617, ENIBARCIMAB, TREBANANIB, VANUCIZUMAB, FARICIMAB, CVX-060, NESVACUMAB

CMF-18952DENND1Cdown-regulatesVSX1activatesR-2361162Drugs (9)
CMF-18964RGS9down-regulatesVSX1activatesR-2361161Drugs (9)
CMF-20321FREM1down-regulatesVSX1repressesR-2356164Drugs (33)
CMF-20861MUC16down-regulatesVSX1activatesR-2361161Drugs (9)
CMF-21411GRIK3down-regulatesVSX1repressesR-2356164Drugs (33)
CMF-21704MUC17down-regulatesVSX1repressesR-2356164Drugs (33)
CMF-21705MUC17down-regulatesVSX1repressesR-2355164Drugs (83)
CMF-21707MUC17down-regulatesVSX1repressesR-2358164Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-24993NLRP1down-regulatesVSX1repressesR-2355165Drugs (83)
CMF-24994NLRP1down-regulatesVSX1repressesR-2364165Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

ALEPLASININ, OCRIPLASMIN

CMF-24996NLRP1down-regulatesVSX1repressesR-2358165Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

NIVOCASAN, EMRICASAN

CMF-24997NLRP1down-regulatesVSX1repressesR-2362165Drugs (8)

Regulator Drugs (0)

Regulon Drugs (8)

AMG-780, MEDI-3617, ENIBARCIMAB, TREBANANIB, VANUCIZUMAB, FARICIMAB, CVX-060, NESVACUMAB

CMF-26499EGFRup-regulatesVSX1repressesR-2365161Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

SELPERCATINIB, PRALSETINIB

CMF-27521KRTAP20-2down-regulatesVSX1repressesR-2356164Drugs (33)
CMF-27523KRTAP20-2down-regulatesVSX1repressesR-2364164Drugs (2)

Regulator Drugs (0)

Regulon Drugs (2)

ALEPLASININ, OCRIPLASMIN

CMF-27524KRTAP20-2down-regulatesVSX1repressesR-2362164Drugs (8)

Regulator Drugs (0)

Regulon Drugs (8)

AMG-780, MEDI-3617, ENIBARCIMAB, TREBANANIB, VANUCIZUMAB, FARICIMAB, CVX-060, NESVACUMAB

CMF-29434EPHA8down-regulatesVSX1repressesR-2356161Drugs (33)
CMF-29811SLC5A7down-regulatesVSX1activatesR-2361162Drugs (9)
CMF-32731SYNDECAN_3_MEDIATED_SIGNALING_EVENTSdown-regulatesVSX1activatesR-2361162Drugs (9)