Gene

Gene details

Summary of gene annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

ZNF93 - zinc finger protein 93

Function

Transcription factor specifically required to repress long interspersed nuclear element 1 (L1) retrotransposons: recognizes and binds L1 sequences and repress their expression by recruiting a repressive complex containing TRIM28/KAP1 (PubMed:25274305). Not able to repress expression of all subtypes of L1 elements. Binds to the 5' end of L1PA4, L1PA5 and L1PA6 subtypes, and some L1PA3 subtypes. Does not bind to L1PA7 or older subtypes nor at the most recently evolved L1PA2 and L1Hs. 50% of L1PA3 elements have lost the ZNF93-binding site, explaining why ZNF93 is not able to repress their expression (PubMed:25274305).

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
81931 ENSG00000184635 ZNF93 P35789

Gene Regulons

List of regulons containing the gene.

A gene can be associated with multiple causal flows as a member of multiple regulons

RegulonProgram# genes# regulators# causal flows
R-1045Pr-58114
R-1105Pr-58118
R-1167Pr-58116
R-1227Pr-58114
R-1600Pr-58117
R-1632Pr-58119
R-1682Pr-581117
R-1694Pr-601115
R-1792Pr-58111
R-2757Pr-581119
R-2891Pr-58115
R-3289Pr-58115
R-3462Pr-581112
R-723Pr-581114