Gene

Gene details

Summary of gene annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

PKD2 - polycystin 2, transient receptor potential cation channel

Function

Component of a heteromeric calcium-permeable ion channel formed by PKD1 and PKD2 that is activated by interaction between PKD1 and a Wnt family member, such as WNT3A and WNT9B (PubMed:27214281). Can also form a functional, homotetrameric ion channel (PubMed:29899465). Functions as a cation channel involved in fluid-flow mechanosensation by the primary cilium in renal epithelium (PubMed:18695040). Functions as outward-rectifying K(+) channel, but is also permeable to Ca(2+), and to a much lesser degree also to Na(+) (PubMed:11854751, PubMed:15692563, PubMed:27071085, PubMed:27991905). May contribute to the release of Ca(2+) stores from the endoplasmic reticulum (PubMed:11854751, PubMed:20881056). Together with TRPV4, forms mechano- and thermosensitive channels in cilium (PubMed:18695040). PKD1 and PKD2 may function through a common signaling pathway that is necessary to maintain the normal, differentiated state of renal tubule cells. Acts as a regulator of cilium length, together with PKD1. The dynamic control of cilium length is essential in the regulation of mechanotransductive signaling. The cilium length response creates a negative feedback loop whereby fluid shear-mediated deflection of the primary cilium, which decreases intracellular cAMP, leads to cilium shortening and thus decreases flow-induced signaling. Also involved in left-right axis specification via its role in sensing nodal flow; forms a complex with PKD1L1 in cilia to facilitate flow detection in left-right patterning. Detection of asymmetric nodal flow gives rise to a Ca(2+) signal that is required for normal, asymmetric expression of genes involved in the specification of body left-right laterality (By similarity).

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
5311 ENSG00000118762 PKD2 Q13563

Gene Regulons

List of regulons containing the gene.

A gene can be associated with multiple causal flows as a member of multiple regulons

RegulonProgram# genes# regulators# causal flows
R-1067Pr-1311149
R-113Pr-1381110
R-1645Pr-1311157
R-177Pr-1311155
R-1853Pr-1311135
R-2104Pr-1311123
R-2145Pr-1311121
R-2426Pr-1371192
R-2431Pr-121172
R-2451Pr-1311168
R-2622Pr-1311135
R-2798Pr-171150
R-2830Pr-121169
R-2864Pr-121162
R-2883Pr-1311129
R-2940Pr-121175
R-3013Pr-1311150
R-3031Pr-1311136
R-3033Pr-121192
R-3072Pr-1311141
R-3180Pr-121174
R-3231Pr-1311153
R-3449Pr-1311160
R-3459Pr-1311156
R-3481Pr-121145
R-3604Pr-121161
R-377Pr-1311122
R-415Pr-1311139
R-576Pr-1311141
R-61Pr-121155
R-626Pr-1311152
R-651Pr-121176
R-679Pr-1311163
R-738Pr-1311145
R-970Pr-1311156
R-995Pr-1311119