Basic gene annotations are collected from Uniprot
and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser
is available.
TBR1 - T-box brain transcription factor 1
Function
Transcriptional repressor involved in multiple aspects of cortical development, including neuronal migration, laminar and areal identity, and axonal projection (PubMed:25232744, PubMed:30250039). As transcriptional repressor of FEZF2, it blocks the formation of the corticospinal (CS) tract from layer 6 projection neurons, thereby restricting the origin of CS axons specifically to layer 5 neurons (By similarity).
Uniprot BrowserEntrez ID | EnsEMBL ID | Preferred Name | Uniprot ID |
---|---|---|---|
10716 | ENSG00000136535 | TBR1 | Q16650 |
Causal Flows
are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation
may causally activate or deactivate a downstream regulator
which then might up- down-regulates a regulon
that contains genes with similar expression profiles and binding sites.
Causal Mechanistic Flows with ENSG00000136535 as Regulator
ID | Mutation | Role | Regulator | Role | Regulon | # downstream regulons | # diffexp regulons | Drugs |
---|---|---|---|---|---|---|---|---|
CMF-05285 | PCSK6 | down-regulates | TBR1 | represses | R-2743 | 3 | 2 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-05372 | KDELC2 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-07895 | ZCWPW1 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-08689 | MYH14 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-09496 | DOCK11 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-09613 | OR9G9 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-09649 | MFSD9 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-09875 | RET | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-14913 | SDHAP3 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-16620 | APOB | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-18453 | LAMA1 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-18817 | SLFN13 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-19928 | ACTL9 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-24789 | HIST1H2BE | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-25643 | SVOPL | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-29953 | GAS2L2 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |
CMF-30802 | RYR1 | down-regulates | TBR1 | represses | R-2743 | 3 | 1 | Drugs (0) Regulator Drugs (0)Regulon Drugs (0) |